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Rename LinkDef files to follow the convetion that LinkDef file names shall be Cbm[Dirname]LinkDef.h. Change library names to follow the convention that ibrary names shall be libCbm[Dirname].so. refs #40 @90m.

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Sample interaction point from vertex extension in z and beam profile in x and y by default in the transport simulation. Refs #241 @2h.

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Rename directory cbmdata->data, cbmbase->base, cbmgenerators->generators and cbmdisplay->eventdisplay. Change build system to take this renaming into account.

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In ROOT header files some using directives have been removed. Add needed namespace std to functions or use using directive. #143 .

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Define new CMake variable SYSTEM_INCLUDE_DIRECTORIES. Add all external include directories, which doesn't belong to CbmRoot there. The compiler will not generate warnings if these warnings are generated from files in these directories.

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Comment declaration of not implemeted functions to solve error when linking executables on Linux. Add missing link directories. Add missing link dependencies. These changes are needed to solve the link error for executables on Linux.

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