fix corrupted version

macro/beamtime/hd2020/gen_digi.sh

-#!/ bin / bash
-#shell script to apply clusterizer calibrations
-#SBATCH - J gen_digi
-#SBATCH                                                                        \
-  - D / lustre / cbm / users / nh / CBM / cbmroot / trunk / macro / beamtime   \
-      / hd2020
-#SBATCH-- time       = 4 : 00 : 00
-#SBATCH-- mem        = 2000
-##SBATCH-- partition = long cRun = $1
+#!/bin/bash
+# shell script to apply clusterizer calibrations
+#SBATCH -J gen_digi
+#SBATCH -D /lustre/cbm/users/nh/CBM/cbmroot/trunk/macro/beamtime/hd2020
+#SBATCH --time=8:00:00
+#SBATCH --mem=2000
+##SBATCH --partition=long
+cRun=$1
 
-  iCalSet = $2((iTmp = $iCalSet))((iBRef = $iTmp % 1000))(
-    (iTmp = $iTmp - $iBRef))((iSet = $iTmp / 1000))((iRef = $iTmp % 1000000))(
-    (iRef = $iRef / 1000))((iTmp = $iTmp - $iRef))((iDut = $iTmp / 1000000))
+iCalSet=$2
+((iTmp  = $iCalSet ))
+((iBRef = $iTmp % 1000))
+((iTmp  = $iTmp - $iBRef))
+((iSet  = $iTmp / 1000))
+((iRef  = $iTmp % 1000000))
+((iRef  = $iRef / 1000))
+((iTmp  = $iTmp - $iRef))
+((iDut  = $iTmp / 1000000))
 
-    iSel2 = $3
+iSel2=$3
 
-  if (($ {iSel2} < 0));
-then((iBRef = -$iSel2)) fi
-
-  cCalSet    = $iCalSet if ((iCalSet < 100000000));
-then cCalSet = "0" $iCalSet fi if ((iCalSet < 10000000));
-then cCalSet = "00" $iCalSet fi if ((iCalSet < 1000000));
-then cCalSet = "000" $iCalSet fi if ((iCalSet < 100000));
-then cCalSet = "0000" $iCalSet fi echo cCalSet = $cCalSet
+cCalSet=$iCalSet
+if (( iCalSet<100000000 )); then 
+cCalSet="0"$iCalSet
+fi
+if (( iCalSet<10000000 )); then 
+cCalSet="00"$iCalSet
+fi
+if (( iCalSet<1000000 )); then 
+cCalSet="000"$iCalSet
+fi
+if (( iCalSet<100000 )); then 
+cCalSet="0000"$iCalSet
+fi
+echo cCalSet = $cCalSet
 
-  Deadtime    = $4 if [[$ {Deadtime} = ""]];
-then Deadtime = 50. fi
+Deadtime=$4
+if [[ ${Deadtime} = "" ]]; then
+Deadtime=50.
+fi
 
-  CalIdMode                                     = $5 if [[$ {CalIdMode} = ""]];
-then echo use native calibration file CalIdMode = $ {cRun} CalFile =
-  $ {cRun} _set$ {cCalSet} _93_1tofClust.hst.root else CalFile =
-    $ {CalIdMode} _set$ {cCalSet} _93_1tofClust.hst.root RunFile =
-      $ {cRun} _set$ {cCalSet} _93_1tofClust.hst.root
-#rm ${RunFile }
-#ln - s ${CalFile } ${RunFile }
-        echo use calibrations from $ {CalFile} fi
+CalIdMode=$5
+if [[ ${CalIdMode} = "" ]]; then
+ echo use native calibration file 
+ CalIdMode=${cRun}
+ CalFile=${cRun}_set${cCalSet}_93_1tofClust.hst.root
+else 
+ CalFile=${CalIdMode}_set${cCalSet}_93_1tofClust.hst.root
+ RunFile=${cRun}_set${cCalSet}_93_1tofClust.hst.root
+# rm ${RunFile}
+# ln -s ${CalFile} ${RunFile} 
+ echo use calibrations from  ${CalFile}
+fi
 
-          CalIdSet = $6 if [[$ {CalIdSet} = ""]]; then
+CalIdSet=$6
+if [[ ${CalIdSet} = "" ]]; then
     echo use native calibration file
     CalIdSet=$cCalSet
 else
     CalFile=${CalIdMode}_set${CalIdSet}_93_1tofClust.hst.root    
 fi
 
+Nevt=$7
+if [[ ${Nevt} = "" ]]; then
+    echo use all events
+    Nevt=-1
+fi
+
 echo gen_digi for $cRun with iDut=$iDut, iRef=$iRef, iSet=$iCalSet, iSel2=$iSel2, iBRef=$iBRef, Deadtime=$Deadtime, CalFile=$CalFile
 
-if [ -e /lustre/cbm ];
-then source / lustre / cbm / users / nh / CBM / cbmroot / trunk / build
-  / config.sh wdir = / lustre / cbm / users / nh / CBM / cbmroot / trunk / macro
-                     / beamtime / mcbm2019 outdir =
-  / lustre / cbm / users / nh / CBM / cbmroot / trunk / macro / beamtime
-  / mcbm2019 / $ {
-  cRun
-}
-else wdir =`pwd` outdir =
-  $ {wdir}
-    / $ {cRun} fi
+if [ -e /lustre/cbm ]; then
+source /lustre/cbm/users/nh/CBM/cbmroot/trunk/build/config.sh 
+wdir=/lustre/cbm/users/nh/CBM/cbmroot/trunk/macro/beamtime/hd2020
+outdir=/lustre/cbm/users/nh/CBM/cbmroot/trunk/macro/beamtime/hd2020/${cRun}
+else 
+wdir=`pwd`
+outdir=${wdir}/${cRun}
+fi
 
-        cd $wdir mkdir $cRun cd $cRun cp..
-    /.rootrc.cp../ rootlogon.C.cp
-  - v..
-      / $ {CalFile}.
-#root - b                                                                      \
-  - q './ana_digi.C(-1,93,1,' $iRef ',1,"' $cRun '",' $iCalSet ',1,' $iSel2 ',' $Deadtime ') '
-#root - b                                                                      \
-  - q '../ana_digi_dev.C(-1,93,1,' $iRef ',1,"' $cRun '",' $iCalSet ',1,' $iSel2 ',' $Deadtime ',"' $CalIdMode '") '
-        root
-  - b
-  - q '../ana_digi_cal.C(-1,93,1,' $iRef ',1,"' $cRun '",' $iCalSet ',1,' $iSel2 ',' $Deadtime ',"' $CalIdMode '") '
-#root - b                                                                      \
-  - q '../ana_digi_cos.C(-1,93,1,' $iRef ',1,"' $cRun '",' $iCalSet ',1,' $iSel2 ',' $Deadtime ',"' $CalIdMode '") '
-#root - b                                                                      \
-  - q '../ana_digi_star.C(-1,93,1,' $iRef ',1,"' $cRun '",' $iCalSet ',1,' $iSel2 ',' $Deadtime ',"' $CalIdMode '") '
+cd $wdir
+mkdir $cRun
+cd    $cRun 
+cp    ../.rootrc .
+cp    ../rootlogon.C .
+cp -v ../${CalFile}  .
+#root -b -q '../ana_digi_cal.C(100000,93,1,'$iRef',1,"'$cRun'",'$iCalSet',1,'$iSel2','$Deadtime',"'$CalIdMode'") '
+root -b -q '../ana_digi_cal.C('$Nevt',93,1,'$iRef',1,"'$cRun'",'$iCalSet',1,'$iSel2','$Deadtime',"'$CalIdMode'") '
+#root -b -q '../ana_digi_cos.C(-1,93,1,'$iRef',1,"'$cRun'",'$iCalSet',1,'$iSel2','$Deadtime',"'$CalIdMode'") '
+#root -b -q '../ana_digi_star.C(-1,93,1,'$iRef',1,"'$cRun'",'$iCalSet',1,'$iSel2','$Deadtime',"'$CalIdMode'") '
 
-    cd..
+cd ..
 
-    mv
-  - v slurm
-  - $ {SLURM_JOB_ID}.out $ {outdir}
-      / GenDigi_$ {cRun} _$ {iCalSet} _$ {iSel2} _$ {iCalIdMode}.out
+mv -v slurm-${SLURM_JOB_ID}.out ${outdir}/GenDigi_${cRun}_${iCalSet}_${iSel2}_${CalIdMode}.out